Transcript: lnc-PDE7A-6:4

Basic information

LNCipedia transcript ID: lnc-PDE7A-6:4 
LNCipedia gene ID: lnc-PDE7A-6
Location (hg19): chr8:66898916-66934568
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 305 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000102657.1|MICT00000345172.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -205.9301 non-coding 
CPAT coding probability 6.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE7A-6:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PDE7A-6:4
5.0 lnc-PDE7A-6:4
5.1 lnc-CPA6-27:1
5.2 lnc-PDE7A-6:4