Transcript: lnc-PDGFA-11:6

Basic information

LNCipedia transcript ID: lnc-PDGFA-11:6 
LNCipedia gene ID: lnc-PDGFA-11
Location (hg19): chr7:87617-93849
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 647 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT118575
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.8586 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDGFA-11:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-11:6
4.0 lnc-AC145676.2.1-11:6
4.1 lnc-AC145676.2.1-11:6
5.0 lnc-AC145676.2.1-11:6
5.1 lnc-PRKAR1B-21:6
5.2 lnc-PDGFA-11:6