Transcript: lnc-PDGFA-13:3

Basic information

LNCipedia transcript ID: lnc-PDGFA-13:3 
LNCipedia gene ID: lnc-PDGFA-13
Location (hg19): chr7:83303-86697
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1029 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT118573
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.2772 non-coding 
CPAT coding probability 14.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDGFA-13:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-13:1
4.0 lnc-AC145676.2.1-13:1
4.1 lnc-AC145676.2.1-13:1
5.0 lnc-AC145676.2.1-13:1
5.1 lnc-PRKAR1B-25:3
5.2 lnc-PDGFA-13:3