Transcript: lnc-PEX11B-3:1

Basic information

LNCipedia transcript ID: lnc-PEX11B-3:1 
LNCipedia gene ID: lnc-PEX11B-3
Location (hg19): chr1:145530952-145532622
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 583 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT005948
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 626.4992 coding 
CPAT coding probability 20.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PEX11B-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PEX11B-3:1
4.0 lnc-PEX11B-3:1
4.1 lnc-PEX11B-3:1
5.0 lnc-PEX11B-3:1
5.1 lnc-FAM72C-27:1
5.2 lnc-PEX11B-3:1