Transcript: lnc-PEX12-2:1

Basic information

LNCipedia transcript ID: lnc-PEX12-2:1 
LNCipedia gene ID: lnc-PEX12-2
Location (hg19): chr17:33913231-33914225
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 995 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033491.1|FTMT26600001744.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.0863 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX12-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PEX12-2:1
5.0 lnc-PEX12-2:1
5.1 lnc-SRCIN1-84:1
5.2 lnc-PEX12-2:1