Transcript: lnc-PEX2-9:1

Basic information

LNCipedia transcript ID: lnc-PEX2-9:1 
LNCipedia gene ID: lnc-PEX2-9
Location (hg19): chr8:77214846-77216522
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 220 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3627_chr8:77214845-77216522_76bGuttman_hES
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.4906 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX2-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PEX2-9:1
4.0 lnc-PEX2-9:1
4.1 lnc-PEX2-9:1
5.0 lnc-PEX2-9:1
5.1 lnc-CPA6-115:1
5.2 lnc-PEX2-9:1