Transcript: lnc-PEX7-4:1

Basic information

LNCipedia transcript ID: lnc-PEX7-4:1 
LNCipedia gene ID: lnc-PEX7-4
Location (hg19): chr6:137105214-137110305
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3952 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000086103.1|FTMT22300000556.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.097 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX7-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PEX7-4:1
5.0 lnc-PEX7-4:1
5.1 lnc-TBPL1-54:2
5.2 lnc-PEX7-4:1