Transcript: lnc-PFDN4-12:1

Basic information

LNCipedia transcript ID: lnc-PFDN4-12:1 
LNCipedia gene ID: lnc-PFDN4-12
Location (hg19): chr20:52522414-52555874
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2652 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT080410
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.8092 non-coding 
CPAT coding probability 10.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFDN4-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PFDN4-3:1
4.0 lnc-PFDN4-3:1
4.1 lnc-PFDN4-1:3
5.0 lnc-PFDN4-1:3
5.1 lnc-MC3R-45:1
5.2 lnc-PFDN4-12:1