Transcript: lnc-PFDN4-13:1

Basic information

LNCipedia transcript ID: lnc-PFDN4-13:1 
LNCipedia gene ID: lnc-PFDN4-13
Location (hg19): chr20:51898091-51899849
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 237 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2139_chr20:51898090-51899849_lymphNode
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.0626 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFDN4-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL354993.1-1:1
4.0 lnc-AL354993.1-1:1
4.1 lnc-AL354993.1-1:1
5.0 lnc-AL354993.1-1:1
5.1 lnc-MC3R-43:1
5.2 lnc-PFDN4-13:1