Transcript: lnc-PFKFB3-10:1

Basic information

LNCipedia transcript ID: lnc-PFKFB3-10:1 
LNCipedia gene ID: lnc-PFKFB3-10
Location (hg19): chr10:6819339-6821226
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1125 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_255_chr10:6819338-6820879_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.7581 non-coding 
CPAT coding probability 5.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKFB3-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL137145.1-10:1
4.0 lnc-AL137145.1-10:1
4.1 lnc-AL137145.1-10:1
5.0 lnc-AL137145.1-10:1
5.1 lnc-NPY4R2-446:1
5.2 lnc-PFKFB3-10:1