Transcript: lnc-PFKFB3-12:2

Basic information

LNCipedia transcript ID: lnc-PFKFB3-12:2 
LNCipedia gene ID: lnc-PFKFB3-12
Location (hg19): chr10:6424342-6448655
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4846 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000104381.1|MICT00000036688.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.7584 non-coding 
CPAT coding probability 13.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKFB3-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL137145.1-12:2
5.0 lnc-AL137145.1-12:2
5.1 lnc-NPY4R2-449:2
5.2 lnc-PFKFB3-12:2