Transcript: lnc-PFKP-34:1

Basic information

LNCipedia transcript ID: lnc-PFKP-34:1 
LNCipedia gene ID: lnc-PFKP-34
Location (hg19): chr10:3944242-3967964
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 538 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_236_chr10:3944241-3967964_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.1688 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKP-34:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PFKP-34:1
4.0 lnc-PFKP-34:1
4.1 lnc-PFKP-34:1
5.0 lnc-PFKP-34:1
5.1 lnc-NPY4R2-503:1
5.2 lnc-PFKP-34:1