Transcript: lnc-PFKP-40:1

Basic information

LNCipedia transcript ID: lnc-PFKP-40:1 
LNCipedia gene ID: lnc-PFKP-40
Location (hg19): chr10:3929123-3930030
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 908 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103334.1|FTMT24000000419.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -61.0232 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKP-40:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PFKP-40:1
5.0 lnc-PFKP-40:1
5.1 lnc-NPY4R2-505:1
5.2 lnc-PFKP-40:1