Transcript: lnc-PFKP-7:3

Basic information

LNCipedia transcript ID: lnc-PFKP-7:3 
LNCipedia gene ID: lnc-PFKP-7
Location (hg19): chr10:3608264-3608503
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 267 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_2801_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.4778 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKP-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PFKP-7:3
4.0 lnc-PFKP-7:3
4.1 lnc-PFKP-7:3
5.0 lnc-PFKP-7:3
5.1 lnc-NPY4R2-517:2
5.2 lnc-PFKP-7:3