Transcript: lnc-PGGT1B-8:2

Basic information

LNCipedia transcript ID: lnc-PGGT1B-8:2 
LNCipedia gene ID: lnc-PGGT1B-8
Location (hg19): chr5:114477021-114489508
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 631 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT103287
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -222.4943 non-coding 
CPAT coding probability 81.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PGGT1B-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PGGT1B-8:2
4.0 lnc-PGGT1B-8:2
4.1 lnc-PGGT1B-8:2
5.0 lnc-PGGT1B-8:2
5.1 lnc-LOX-116:2
5.2 lnc-PGGT1B-8:2