Transcript: lnc-PGM5-1:2

Basic information

LNCipedia transcript ID: lnc-PGM5-1:2 
LNCipedia gene ID: lnc-PGM5-1
Location (hg19): chr9:71155951-71259358
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1740 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT131748
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.4249 non-coding 
CPAT coding probability 4.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGM5-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PGM5-1:2
4.0 lnc-PGM5-1:2
4.1 lnc-PGM5-1:2
5.0 lnc-PGM5-1:2
5.1 lnc-ZNF658-29:1
5.2 lnc-PGM5-1:2