Transcript: lnc-PGPEP1L-12:2

Basic information

LNCipedia transcript ID: lnc-PGPEP1L-12:2 
LNCipedia gene ID: lnc-PGPEP1L-12
RefSeq ID: NR_110756
Location (hg19): chr15:98096514-98103928
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1397 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110756; NR_110756.1
Alternative gene names: LOC101927310


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.2249 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGPEP1L-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-82I10.1.1-5:4
4.0 lnc-RP11-82I10.1.1-5:4
4.1 lnc-RP11-82I10.1.1-5:4
5.0 lnc-RP11-82I10.1.1-5:4
5.1 lnc-CIB1-77:2
5.2 lnc-PGPEP1L-12:2