Transcript: lnc-PGPEP1L-21:1

Basic information

LNCipedia transcript ID: lnc-PGPEP1L-21:1 
LNCipedia gene ID: lnc-PGPEP1L-21
Location (hg19): chr15:97453251-97458426
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1238_chr15:97453250-97458426_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.233 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGPEP1L-21:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC016251.1-20:1
4.0 lnc-AC016251.1-20:1
4.1 lnc-AC016251.1-20:1
5.0 lnc-AC016251.1-20:1
5.1 lnc-CIB1-68:1
5.2 lnc-PGPEP1L-21:1