Transcript: lnc-PGRMC2-3:6

Basic information

LNCipedia transcript ID: lnc-PGRMC2-3:6 
LNCipedia gene ID: lnc-PGRMC2-3
Location (hg19): chr4:128859938-128886300
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 621 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT098253
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -304.4363 non-coding 
CPAT coding probability 73.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PGRMC2-3:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PGRMC2-3:2
4.0 lnc-MFSD8-3:5
4.1 lnc-MFSD8-3:5
5.0 lnc-MFSD8-3:5
5.1 lnc-TRPC3-31:2
5.2 lnc-PGRMC2-3:6