Transcript: lnc-PHC1-1:1

Basic information

LNCipedia transcript ID: lnc-PHC1-1:1 
LNCipedia gene ID: lnc-PHC1-1
Location (hg19): chr12:9109040-9111918
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2187 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_2621_NR_026971
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.7773 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PHC1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHC1-1:1
4.0 lnc-PHC1-1:1
4.1 lnc-PHC1-1:1
5.0 lnc-PHC1-1:1
5.1 lnc-A2ML1-1:8
5.2 lnc-PHC1-1:1