Transcript: lnc-PIAS2-2:1

Basic information

LNCipedia transcript ID: lnc-PIAS2-2:1 
LNCipedia gene ID: lnc-PIAS2-2
Ensembl Gene ID: ENSG00000274776
Ensembl Transcript ID: ENST00000621730
Location (hg19): chr18:44366662-44369260
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2599 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000621730.1
Alternative gene names: ENSG00000274776.1; RP11-687F6.5; AC090241.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.1089 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIAS2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PIAS2-2:1
4.1 lnc-PIAS2-2:1
5.0 lnc-PIAS2-2:1
5.1 lnc-SMAD2-15:1
5.2 lnc-PIAS2-2:1