Transcript: lnc-PIK3C3-18:2

Basic information

LNCipedia transcript ID: lnc-PIK3C3-18:2 
LNCipedia gene ID: lnc-PIK3C3-18
Location (hg19): chr18:37550435-37571699
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 266 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000035663.1|FTMT27100005350.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.9165 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIK3C3-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PIK3C3-18:2
5.0 lnc-PIK3C3-18:2
5.1 lnc-CTIF-79:5
5.2 lnc-PIK3C3-18:2