Transcript: lnc-PIP5K1C-1:1

Basic information

LNCipedia transcript ID: lnc-PIP5K1C-1:1 
LNCipedia gene ID: lnc-PIP5K1C-1
Location (hg19): chr19:3710223-3712947
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2245 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000508018
Alternative gene names: ENSG00000248889


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.735 non-coding 
CPAT coding probability 6.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIP5K1C-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIP5K1C-1:1
3.1 lnc-PIP5K1C-1:1
4.0 lnc-PIP5K1C-1:1
4.1 lnc-PIP5K1C-1:1
5.0 lnc-PIP5K1C-1:1
5.1 lnc-ZNF77-43:1
5.2 lnc-PIP5K1C-1:1