Transcript: lnc-PITPNC1-1:8

Basic information

LNCipedia transcript ID: lnc-PITPNC1-1:8 
LNCipedia gene ID: lnc-PITPNC1-1
Location (hg19): chr17:65241423-65269999
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3302 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000266473.1|MICT00000152875.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.9696 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PITPNC1-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PITPNC1-1:8
5.0 lnc-PITPNC1-1:8
5.1 lnc-TANC2-86:9
5.2 lnc-PITPNC1-1:8