Transcript: lnc-PITPNC1-1:9

Basic information

LNCipedia transcript ID: lnc-PITPNC1-1:9 
LNCipedia gene ID: lnc-PITPNC1-1
RefSeq ID: NR_136398
Location (hg19): chr17:65240892-65258196
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 850 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136398.1
Alternative gene names: LOC101928021


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.8555 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PITPNC1-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TANC2-86:1
5.1 lnc-TANC2-86:1
5.2 lnc-PITPNC1-1:9