Transcript: lnc-PKD2L1-2:1

Basic information

LNCipedia transcript ID: lnc-PKD2L1-2:1 
LNCipedia gene ID: lnc-PKD2L1-2
Location (hg19): chr10:102085266-102096267
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 645 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_359_chr10:102085265-102096267_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.3545 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PKD2L1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PKD2L1-2:1
4.0 lnc-PKD2L1-2:1
4.1 lnc-PKD2L1-2:1
5.0 lnc-PKD2L1-2:1
5.1 lnc-CPN1-7:1
5.2 lnc-PKD2L1-2:1