Transcript: lnc-PKN3-1:8

Basic information

LNCipedia transcript ID: lnc-PKN3-1:8 
LNCipedia gene ID: lnc-PKN3-1
Location (hg19): chr9:131486724-131495520
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 776 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223478.1|FTMT23500048507.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -141.8595 non-coding 
CPAT coding probability 20.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PKN3-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PKN3-1:8
5.0 lnc-PKN3-1:8
5.1 lnc-PTPA-22:5
5.2 lnc-PKN3-1:8