Transcript: lnc-PLCD3-1:16

Basic information

LNCipedia transcript ID: lnc-PLCD3-1:16 
LNCipedia gene ID: lnc-PLCD3-1
Location (hg19): chr17:43223075-43224857
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1783 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224505.2|FTMT26600002320.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -90.9182 non-coding 
CPAT coding probability 5.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCD3-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLCD3-1:16
5.0 lnc-PLCD3-1:16
5.1 lnc-GFAP-16:4
5.2 lnc-PLCD3-1:16