Transcript: lnc-PLD1-2:1

Basic information

LNCipedia transcript ID: lnc-PLD1-2:1 
LNCipedia gene ID: lnc-PLD1-2
Location (hg19): chr3:171758836-171760763
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1893 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000427116; NONHSAT093240
Alternative gene names: ENSG00000228676; AC069259.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.486 non-coding 
CPAT coding probability 14.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLD1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLD1-2:1
3.1 lnc-PLD1-2:1
4.0 lnc-PLD1-2:1
4.1 lnc-PLD1-2:1
5.0 lnc-PLD1-2:1
5.1 lnc-TBL1XR1-31:1
5.2 lnc-PLD1-2:1