Transcript: lnc-PLD3-4:2

Basic information

LNCipedia transcript ID: lnc-PLD3-4:2 
LNCipedia gene ID: lnc-PLD3-4
Location (hg19): chr19:40791444-40795689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4246 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000039306.1|HBMT00000710078.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.9369 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLD3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLD3-4:2
5.0 lnc-PLD3-4:2
5.1 lnc-MAP3K10-4:1
5.2 lnc-PLD3-4:2