Transcript: lnc-PLEKHM1-3:8

Basic information

LNCipedia transcript ID: lnc-PLEKHM1-3:8 
LNCipedia gene ID: lnc-PLEKHM1-3
Location (hg19): chr17:43585273-43585899
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 529 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054132
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 202.086 coding 
CPAT coding probability 5.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLEKHM1-3:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC091132.2-3:5
4.0 lnc-AC091132.2-3:5
4.1 lnc-AC091132.2-3:5
5.0 lnc-AC091132.2-3:5
5.1 lnc-GFAP-34:5
5.2 lnc-PLEKHM1-3:8