Transcript: lnc-PLPP3-12:16

Basic information

LNCipedia transcript ID: lnc-PLPP3-12:16 
LNCipedia gene ID: lnc-PLPP3-12
Ensembl Gene ID: ENSG00000260971
Ensembl Transcript ID: ENST00000641876
Location (hg19): chr1:56714558-56797934
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 454 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641876.1
Alternative gene names: ENSG00000260971.4; AC119674.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -271.3931 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP3-12:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-C8B-12:16
5.1 lnc-C8B-12:16
5.2 lnc-PLPP3-12:16