Transcript: lnc-PLPP3-12:17

Basic information

LNCipedia transcript ID: lnc-PLPP3-12:17 
LNCipedia gene ID: lnc-PLPP3-12
Ensembl Gene ID: ENSG00000260971
Ensembl Transcript ID: ENST00000642031
Location (hg19): chr1:56639093-56751242
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 997 bp
Exons: 6
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642031.1
Alternative gene names: ENSG00000260971.4; AC119674.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -48.2069 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP3-12:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-C8B-12:17
5.1 lnc-C8B-12:17
5.2 lnc-PLPP3-12:17