Transcript: lnc-PLPPR5-4:2

Basic information

LNCipedia transcript ID: lnc-PLPPR5-4:2 
LNCipedia gene ID: lnc-PLPPR5-4
Location (hg19): chr1:98213108-98233679
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1431 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_97_chr1:98213107-98217461
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.2699 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPPR5-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LPPR5.1-4:1
4.0 lnc-LPPR5.1-4:1
4.1 lnc-LPPR5.1-4:1
5.0 lnc-LPPR5.1-4:1
5.1 lnc-PLPPR5-9:1
5.2 lnc-PLPPR5-4:2