Transcript: lnc-PLPPR5-5:3

Basic information

LNCipedia transcript ID: lnc-PLPPR5-5:3 
LNCipedia gene ID: lnc-PLPPR5-5
Location (hg19): chr1:98156763-98187210
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1036 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT004718
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 577.3111 coding 
CPAT coding probability 40.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLPPR5-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LPPR5.1-5:1
4.0 lnc-LPPR5.1-5:1
4.1 lnc-LPPR5.1-5:1
5.0 lnc-LPPR5.1-5:1
5.1 lnc-PLPPR5-10:1
5.2 lnc-PLPPR5-5:3