Transcript: lnc-PLSCR3-1:1

Basic information

LNCipedia transcript ID: lnc-PLSCR3-1:1 
LNCipedia gene ID: lnc-PLSCR3-1
Location (hg19): chr17:7293047-7307450
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2049 bp
Exons: 10
Sources: Refseq - Dec 2014
Alternative transcript names: NR_037719
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 4016.0194 coding 
CPAT coding probability 99.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLSCR3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf61-1:5
4.0 lnc-PLSCR3-1:1
4.1 lnc-PLSCR3-1:1
5.0 lnc-PLSCR3-1:1
5.1 lnc-YBX2-7:1
5.2 lnc-PLSCR3-1:1