Transcript: lnc-PLXNA4-1:2

Basic information

LNCipedia transcript ID: lnc-PLXNA4-1:2 
LNCipedia gene ID: lnc-PLXNA4-1
Location (hg19): chr7:132642526-132644331
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1806 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT123438
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8262 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLXNA4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC008038.1-1:1
4.0 lnc-AC008038.1-1:1
4.1 lnc-AC008038.1-1:1
5.0 lnc-AC008038.1-1:1
5.1 lnc-C7orf49-30:1
5.2 lnc-PLXNA4-1:2