Transcript: lnc-PLXND1-3:2

Basic information

LNCipedia transcript ID: lnc-PLXND1-3:2 
LNCipedia gene ID: lnc-PLXND1-3
Ensembl Gene ID: ENSG00000203644
Ensembl Transcript ID: ENST00000366451
Location (hg19): chr3:129565891-129566800
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 910 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000366451.3
Alternative gene names: ENSG00000203644.3; RP11-332M2.1; AC083799.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.5794 non-coding 
CPAT coding probability 5.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLXND1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PLXND1-3:2
4.1 lnc-PLXND1-3:2
5.0 lnc-PLXND1-3:2
5.1 lnc-H1FX-11:2
5.2 lnc-PLXND1-3:2