Transcript: lnc-PNMA2-6:1

Basic information

LNCipedia transcript ID: lnc-PNMA2-6:1 
LNCipedia gene ID: lnc-PNMA2-6
Location (hg19): chr8:26723017-26724760
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 464 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014512; NONHSAT125672
Alternative gene names: XLOC_007030; linc-ADRA1A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -340.7447 non-coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PNMA2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PNMA2-2:1
3.1 lnc-PNMA2-2:1
4.0 lnc-PNMA2-6:1
4.1 lnc-PNMA2-6:1
5.0 lnc-PNMA2-6:1
5.1 lnc-ENTPD4-30:1
5.2 lnc-PNMA2-6:1