Transcript: lnc-PNPLA8-2:4

Basic information

LNCipedia transcript ID: lnc-PNPLA8-2:4 
LNCipedia gene ID: lnc-PNPLA8-2
Location (hg19): chr7:108204826-108210089
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 880 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT122740
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 79.5303 coding 
CPAT coding probability 70.22% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PNPLA8-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THAP5-2:4
4.0 lnc-PNPLA8-2:4
4.1 lnc-PNPLA8-2:4
5.0 lnc-PNPLA8-2:4
5.1 lnc-NRCAM-3:4
5.2 lnc-PNPLA8-2:4