Transcript: lnc-PNRC2-2:3

Basic information

LNCipedia transcript ID: lnc-PNRC2-2:3 
LNCipedia gene ID: lnc-PNRC2-2
Location (hg19): chr1:24399317-24410767
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1846 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_31_NR_027087
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.8242 non-coding 
CPAT coding probability 41.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PNRC2-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PNRC2-2:3
4.0 lnc-PNRC2-2:3
4.1 lnc-PNRC2-2:3
5.0 lnc-PNRC2-2:3
5.1 lnc-GRHL3-8:3
5.2 lnc-PNRC2-2:3