Transcript: lnc-POLD4-1:2

Basic information

LNCipedia transcript ID: lnc-POLD4-1:2 
LNCipedia gene ID: lnc-POLD4-1
Location (hg19): chr11:67119043-67141055
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 711 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000543494.1; AP003419.11-001; OTTHUMT00000396213.1; NONHSAT022404
Alternative gene names: ENSG00000256514.1; AP003419.11; OTTHUMG00000167774.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 593.5267 coding 
CPAT coding probability 87.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-POLD4-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLCF1-1:1
4.0 lnc-POLD4-1:2
4.1 lnc-POLD4-1:2
5.0 lnc-POLD4-1:2
5.1 lnc-POLD4-1:2
5.2 lnc-POLD4-1:2