Transcript: lnc-POLE4-5:1

Basic information

LNCipedia transcript ID: lnc-POLE4-5:1 
LNCipedia gene ID: lnc-POLE4-5
Ensembl Gene ID: ENSG00000270696
Ensembl Transcript ID: ENST00000604845
Location (hg19): chr2:75887588-75889334
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1747 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT071808; ENST00000604845.1
Alternative gene names: ENSG00000270696.1; RP11-342K6.1; AC005034.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.5215 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLE4-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLE4-5:1
4.0 lnc-POLE4-5:1
4.1 lnc-POLE4-5:1
5.0 lnc-POLE4-5:1
5.1 lnc-POLE4-32:1
5.2 lnc-POLE4-5:1