Transcript: lnc-POLE4-8:14

Basic information

LNCipedia transcript ID: lnc-POLE4-8:14 
HGNC Gene Symbol: lnc-POLE4-8    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1293
Ensembl Gene ID: ENSG00000230836
Ensembl Transcript ID: ENST00000453951
Location (hg19): chr2:75167385-75169797
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1266 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00002938; ENST00000453951; ENST00000453951.1; AC104135.4-001; OTTHUMT00000328655.1; NONHSAT071775
Alternative gene names: XLOC_001537; linc-POLE4; ENSG00000230836; AC104135.4; ENSG00000230836.1; OTTHUMG00000152931.1; LINC01293


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.0915 non-coding 
CPAT coding probability 2.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLE4-8:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLE4-1:9
3.1 lnc-HK2-1:9
4.0 lnc-POLE4-8:14
4.1 lnc-POLE4-8:14
5.0 lnc-POLE4-8:14
5.1 lnc-POLE4-8:14
5.2 lnc-POLE4-8:14