Transcript: lnc-POLR1A-8:1

Basic information

LNCipedia transcript ID: lnc-POLR1A-8:1 
LNCipedia gene ID: lnc-POLR1A-8
Location (hg19): chr2:86130446-86131926
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1052 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005192; NONHSAT072074
Alternative gene names: XLOC_002192; linc-ST3GAL5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -224.0313 non-coding 
CPAT coding probability 8.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLR1A-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ST3GAL5-1:1
3.1 lnc-ST3GAL5-1:1
4.0 lnc-ST3GAL5-1:1
4.1 lnc-ST3GAL5-1:1
5.0 lnc-ST3GAL5-1:1
5.1 lnc-ZNF514-145:1
5.2 lnc-POLR1A-8:1