Transcript: lnc-POLR2B-4:3

Basic information

LNCipedia transcript ID: lnc-POLR2B-4:3 
LNCipedia gene ID: lnc-POLR2B-4
Location (hg19): chr4:57826726-57827705
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 980 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT096532; FPKM1_group_23397_transcript_7
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.2933 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLR2B-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-REST-4:1
4.0 lnc-REST-4:1
4.1 lnc-REST-4:1
5.0 lnc-REST-4:1
5.1 lnc-CEP135-33:1
5.2 lnc-POLR2B-4:3