Transcript: lnc-POLR2B-5:3

Basic information

LNCipedia transcript ID: lnc-POLR2B-5:3 
LNCipedia gene ID: lnc-POLR2B-5
Location (hg19): chr4:57828064-57828837
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 774 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT096534; FPKM1_group_23397_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.0029 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLR2B-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-REST-5:1
4.0 lnc-REST-5:1
4.1 lnc-REST-5:1
5.0 lnc-REST-5:1
5.1 lnc-CEP135-34:1
5.2 lnc-POLR2B-5:3