Transcript: lnc-POLRMT-6:11

Basic information

LNCipedia transcript ID: lnc-POLRMT-6:11 
LNCipedia gene ID: lnc-POLRMT-6
Ensembl Gene ID: ENSG00000267751
Ensembl Transcript ID: ENST00000589457
Location (hg19): chr19:567210-571745
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 721 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000589457.2
Alternative gene names: ENSG00000267751.5; AC009005.2; AC009005.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.3501 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLRMT-6:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POLRMT-6:11
4.1 lnc-POLRMT-6:11
5.0 lnc-POLRMT-6:11
5.1 lnc-ZNF77-151:20
5.2 lnc-POLRMT-6:11