Transcript: lnc-POM121L12-2:1

Basic information

LNCipedia transcript ID: lnc-POM121L12-2:1 
LNCipedia gene ID: lnc-POM121L12-2
Location (hg19): chr7:52561402-52569695
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 341 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013447; NONHSAT120619
Alternative gene names: XLOC_006100; linc-POM121L12-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -182.201 non-coding 
CPAT coding probability 3.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POM121L12-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POM121L12-2:1
3.1 lnc-POM121L12-2:1
4.0 lnc-POM121L12-2:1
4.1 lnc-POM121L12-2:1
5.0 lnc-POM121L12-2:1
5.1 lnc-CCT6A-73:2
5.2 lnc-POM121L12-2:1