Transcript: lnc-PON1-1:2

Basic information

LNCipedia transcript ID: lnc-PON1-1:2 
LNCipedia gene ID: lnc-PON1-1
Ensembl Gene ID: ENSG00000236197
Ensembl Transcript ID: ENST00000417881
Location (hg19): chr7:94784025-94843644
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2569 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT122060; ENST00000417881.2
Alternative gene names: ENSG00000236197.2; AC002429.5; ENSG00000236197.3; AC002429.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.9531 non-coding 
CPAT coding probability 7.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PON1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PON1-1:2
4.0 lnc-PON1-1:2
4.1 lnc-PON1-1:2
5.0 lnc-PON1-1:2
5.1 lnc-PEX1-41:2
5.2 lnc-PON1-1:2